Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913019.1_cds_XP_016463112.1_56266
CDS Infomation

[gene=LOC107786175] [db_xref=GeneID:107786175] [protein=65-kDa microtubule-associated protein 8-like] [protein_id=XP_016463112.1] [location=complement(join(51417..51740,51971..52045,53077..53150,53384..53471,53553..53704,53791..53950,54032..54187,54448..54660,54789..55046,56144..56347,56429..56614))] [gbkey=CDS]
Sequence

ATGTATTCTAAAGGACATCAAAATTTAATTGATTACCAGAGAAAGACTCTTCTCAGGAGC
CCCAGGCTTGTGCTCCCTCCGCTCAGAAGCTGGTCTTCTCATATGGGGTCTGTTCAAGTG
CCATTTGGAATAAGAAGTTCAGCATTGCTCGAGACATCATGCGGATATTTGCTGCAAGAA
TTACAGATGATATGGGATGAAGTGGGAGAAGATCAGTTTGAGAGGGAAAAGGTTTTAGTG
GACATTGAACAGGAGTGTCTGGAAGTTTACAGAAGGAAGGTTGACAATGCAAACATCTCC
AGAGCTCGACTTCATCAAGAATTGGCAGATTCAGAGGCTGAGTTCACCCATCTCCTTTTA
TTACTCGACGAAAGATCACTCCCCGGAAGGCCAGAAAAGATGACTGGAACACTAAAGGAA
CAGCTAGAGTCAATTGCACCTGCTCTGAGAGAGATGCGAATCAGAAAAGAAGAAAGGGTG
AAAAAATTCAGAGCTGTTCAAGGACAAATTCAGAAAATTTCTGCTGAAATAGCAGGCCAA
TCAGAGTACAATGATTCATTATCAAATGTTTTACTAAATGGGAATGATCTATCACTAAAG
AAACTAGAAGAGTTCCAGAACGAGCTTCAGCGGCTTCAAAATGAGAAGATTGAGAGGCTT
CAAAAGGTTGAAAACTACATTAGCATGATCCGGTGCTTAGCAGCAACGCTGGGAACAGAT
TCTTCTTTGATCATTACAAAGGTCCATCCAAGCCTGAATGAATTATCTGGACTATCAAAA
AACATTAGTGACAGTATATTGGAAAAACTTGACAGCACAGTTCAGTTACTAGAAGCAGAT
AAAAGAATACGGCTTGAAAAGCTTCACCAACTAGGGAAAGCGTTGACAAACTTGTGGAAT
CTCATGGACACACCCCAGAAAGACCGCGTGATGTTCTCTAATGTCACTGCTTTGATATCA
TGGTCATCAGAAGATATCTCCATTCCTGGAAGCCTTACTCTGGACATAATCCAGCAGGCT
GGCACAGAAGTCAGGAGACTGGATCAGCTAAAAGCAAGCAAGATGAAAGAGCTTTTCCTC
AGAAAACAAATAGAGCTCGAGGAGATCTGCAAGCGATCCCACATGGAAATTCCCTCACGG
CCAGAGATGGAAAATATAATTAAACTAATGAACTCTGGGGAGATTGACCATGCTGACCTC
CTCACGAGCATGGATAAACAGATATCACAAGCACAAGAAGAAGCATCTAGCAGGAAGGCT
ATAATGGAGAAGGTAGAAAAATGGATATTAGCTCGTGATGAGGAACGATGGTTGGAAGAG
TATAGCAGGGACGACAACCGGTATTCTGTAAGTAGAGGTGCTCACAAGAATTTGAGAAGA
GCAGAACGAGCCAGAGTCATGGTTAACAAAATACCAGCTTTGGTGGATATGCTGATAGCA
AAGACTAAAAGCTGGGAGGAAGAAAGAAAGAAACCTTTTGTATATGATGAGGTACCGCTA
CTTGCAATGTTGGAGGAGTATAATTTTCTAAGGAAAGAAAGAGATGAAGAGAAACAAAGA
CAACGGGAAAAGAAGAAAGCGCCGAATCAGGTGCCGGTCGGACAAGAAAATCTCTTTGTT
CTAAGGCCAAGCACCAGCAGCAAACGTATATCTGGTGGAAGCATAAATGGAGGCTTCAAC
AAGGCTACACCTTTGAATAGAAAGTCTTCTTTGGGTATACAACAGCTGGGATCAACGACC
ATTAACACACCACAACAAAGCATTTCTCTGTTAAAGGAAGCAAAGAAAGAACACCATAGA
AAGATCCTTACCCATAGTCGCTTTGCTTTTCATCCAGGAGATGATTCAGCTTCAGTAGTC
TCATCATTTTCAGGCCCCTTTTCACCTTAG

Peptide Sequence

PEP ID

XP_016463112.1
PEP Infomation

PREDICTED: 65-kDa microtubule-associated protein 8-like [Nicotiana tabacum]
Sequence

MYSKGHQNLIDYQRKTLLRSPRLVLPPLRSWSSHMGSVQVPFGIRSSALLETSCGYLLQE
LQMIWDEVGEDQFEREKVLVDIEQECLEVYRRKVDNANISRARLHQELADSEAEFTHLLL
LLDERSLPGRPEKMTGTLKEQLESIAPALREMRIRKEERVKKFRAVQGQIQKISAEIAGQ
SEYNDSLSNVLLNGNDLSLKKLEEFQNELQRLQNEKIERLQKVENYISMIRCLAATLGTD
SSLIITKVHPSLNELSGLSKNISDSILEKLDSTVQLLEADKRIRLEKLHQLGKALTNLWN
LMDTPQKDRVMFSNVTALISWSSEDISIPGSLTLDIIQQAGTEVRRLDQLKASKMKELFL
RKQIELEEICKRSHMEIPSRPEMENIIKLMNSGEIDHADLLTSMDKQISQAQEEASSRKA
IMEKVEKWILARDEERWLEEYSRDDNRYSVSRGAHKNLRRAERARVMVNKIPALVDMLIA
KTKSWEEERKKPFVYDEVPLLAMLEEYNFLRKERDEEKQRQREKKKAPNQVPVGQENLFV
LRPSTSSKRISGGSINGGFNKATPLNRKSSLGIQQLGSTTINTPQQSISLLKEAKKEHHR
KILTHSRFAFHPGDDSASVVSSFSGPFSP

Transcript Sequence

Gene sequence data has not been registered.